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Joined: 13 Sep 2005
Posts: 162
Location: WARSAW

PostPosted: Sun Jul 15, 2012 12:16 pm    Post subject: Gibc and gcc dep error Reply with quote

I just install brand new gentoo and i have problem :0)

When I want to updade system i have this :

WawGate01 ~ # emerge -DuNav system

 * IMPORTANT: 1 news items need reading for repository 'gentoo'.
 * Use eselect news to read news items.

These are the packages that would be merged, in order:

Calculating dependencies... done!

[nomerge       ] virtual/ssh-0  USE="-minimal"
[nomerge       ]  net-misc/openssh-5.9_p1-r4  USE="hpn pam tcpd -X -X509 -kerberos -ldap -libedit (-selinux) -skey -static"
[nomerge       ]   virtual/pkgconfig-0
[nomerge       ]    dev-util/pkgconfig-0.26  USE="-hardened"
[nomerge       ]     dev-libs/glib-2.30.3  USE="static-libs -debug -doc (-fam) (-selinux) -systemtap -test -utils -xattr"
[ebuild  N     ]      x11-misc/shared-mime-info-1.0  0 kB
[ebuild  N     ]    dev-util/pkgconfig-0.26  USE="-hardened" 0 kB
[ebuild  N     ]     dev-libs/glib-2.30.3  USE="static-libs -debug -doc (-fam) (-selinux) -systemtap -test -utils -xattr" 0 kB
[ebuild  N     ]      dev-util/gtk-doc-am-1.18  0 kB
[ebuild  N     ]       virtual/pkgconfig-0  0 kB
[nomerge       ] x11-misc/shared-mime-info-1.0
[ebuild  N     ]  dev-util/intltool-0.50.2  0 kB
[ebuild  N     ]   dev-perl/XML-Parser-2.410.0  0 kB
[ebuild  N     ]   sys-devel/gettext-  USE="acl cxx openmp -doc -emacs -git -nls" 14,785 kB
[ebuild  N     ]    dev-libs/libxml2-2.8.0_rc1  USE="ipv6 readline -debug -doc -examples -icu -lzma -python -static-libs -test" 4,795 kB
[nomerge       ] sys-devel/gcc-4.5.3-r2  USE="cxx fortran mudflap nptl openmp (-altivec) -bootstrap -build -doc (-fixed-point) -gcj -graphite -gtk (-hardened) (-libssp) -lto (-multilib) -multislot -nls -nocxx -nopie -nossp -objc -objc++ -objc-gc -test -vanilla"
[ebuild  N     ]  sys-devel/flex-2.5.35_p10  USE="-nls -static -test" 0 kB
[ebuild  N     ]   sys-devel/libtool-2.4-r1  USE="-test -vanilla" 0 kB
[ebuild  N     ]    sys-devel/automake-1.11.1  0 kB
[ebuild  N     ]     sys-apps/help2man-1.40.8  USE="-nls" 0 kB
[nomerge       ] net-misc/iputils-20101006-r2  USE="ipv6 ssl -SECURITY_HAZARD -doc -idn -static"
[nomerge       ]  dev-libs/openssl-1.0.0j  USE="zlib -bindist -gmp -kerberos -rfc3779 -sse2 -static-libs -test"
[nomerge       ]   dev-lang/perl-5.12.4-r1  USE="berkdb gdbm -build -debug -doc -ithreads"
[ebuild  N     ]    app-admin/perl-cleaner-2.7  0 kB
[ebuild  N     ]     dev-lang/perl-5.12.4-r1  USE="berkdb gdbm -build -debug -doc -ithreads" 0 kB
[nomerge       ] sys-process/psmisc-22.16  USE="ipv6 -X -nls (-selinux)"
[nomerge       ]  sys-devel/libtool-2.4-r1  USE="-test -vanilla"
[ebuild  N     ]   sys-devel/autoconf-2.68  USE="-emacs" 0 kB
[ebuild  N     ] net-misc/wget-1.13.4-r1  USE="ipv6 ssl -debug -gnutls -idn -nls -ntlm -static" 1,420 kB
[ebuild  N     ] sys-fs/e2fsprogs-1.42  USE="-nls -static-libs" 5,577 kB
[ebuild  N     ] virtual/dev-manager-0  0 kB
[ebuild  N     ]  sys-fs/udev-171-r6  USE="rule_generator -action_modeswitch -build -debug -edd -extras -floppy -gudev -hwdb -introspection -keymap (-selinux) -test" 601 kB
[ebuild  N     ] virtual/ssh-0  USE="-minimal" 0 kB
[ebuild  N     ]  net-misc/openssh-5.9_p1-r4  USE="hpn pam tcpd -X -X509 -kerberos -ldap -libedit (-selinux) -skey -static" 1,106 kB
[ebuild  N     ] virtual/editor-0  0 kB
[ebuild  N     ]  app-editors/nano-2.3.1-r1  USE="unicode -debug -justify -minimal -ncurses -nls -slang -spell" 1,587 kB
[nomerge       ] app-admin/python-updater-0.10
[nomerge       ]  sys-apps/portage-  USE="(ipc) -build -doc -epydoc (-pypy1_9) -python2 -python3 (-selinux) -xattr" LINGUAS="pl"
[nomerge       ]   dev-lang/python-3.2.3  USE="gdbm ipv6 readline ssl threads (wide-unicode) xml -build -doc -examples -ncurses -sqlite -tk -wininst"
[ebuild  N     ]    app-admin/eselect-python-20100321  6 kB
[nomerge       ] virtual/man-0
[nomerge       ]  sys-apps/man-1.6g  USE="lzma -nls"
[ebuild  N     ]   sys-apps/groff-1.21  USE="-X -examples" LINGUAS="-ja" 3,774 kB
[ebuild  N     ]  sys-apps/man-1.6g  USE="lzma -nls" 251 kB
[ebuild  N     ] sys-apps/grep-2.9  USE="pcre -nls" 1,017 kB
[ebuild  N     ]  dev-libs/libpcre-8.30-r2  USE="bzip2 cxx jit readline recursion-limit (unicode) zlib -pcre16 -static-libs" 1,220 kB
[nomerge       ] sys-fs/e2fsprogs-1.42  USE="-nls -static-libs"
[ebuild  N     ]  sys-libs/e2fsprogs-libs-1.42  USE="-nls -static-libs" 501 kB
[nomerge       ] x11-misc/shared-mime-info-1.0
[nomerge       ]  sys-devel/gettext-  USE="acl cxx openmp -doc -emacs -git -nls"
[nomerge       ]   virtual/acl-0-r1  USE="-static-libs"
[nomerge       ]    sys-apps/acl-2.2.51  USE="(-nfs) -nls -static-libs"
[ebuild  N     ]     sys-apps/attr-2.4.46-r1  USE="-nls -static-libs" 331 kB
[ebuild  N     ] net-misc/rsync-3.0.9  USE="acl iconv ipv6 -static -xattr" 775 kB
[nomerge       ] sys-apps/baselayout-2.1-r1  USE="-build"
[ebuild  N     ]  sys-apps/openrc-  USE="pam unicode -debug -ncurses (-selinux) -static-libs" 163 kB
[ebuild  N     ]   sys-process/psmisc-22.16  USE="ipv6 -X -nls (-selinux)" 455 kB
[nomerge       ] dev-lang/python-3.2.3  USE="gdbm ipv6 readline ssl threads (wide-unicode) xml -build -doc -examples -ncurses -sqlite -tk -wininst"
[ebuild  N     ]  app-admin/python-updater-0.10  10 kB
[ebuild  N     ]   dev-lang/python-3.2.3  USE="gdbm ipv6 readline ssl threads (wide-unicode) xml -build -doc -examples -ncurses -sqlite -tk -wininst" 8,775 kB
[ebuild  N     ] virtual/package-manager-0  0 kB
[ebuild  N     ]  sys-apps/portage-  USE="(ipc) -build -doc -epydoc (-pypy1_9) -python2 -python3 (-selinux) -xattr" LINGUAS="pl" 860 kB
[nomerge       ] sys-apps/coreutils-8.14  USE="acl unicode -caps -gmp -nls (-selinux) -static -vanilla -xattr"
[ebuild  N     ]  sys-apps/acl-2.2.51  USE="(-nfs) -nls -static-libs" 377 kB
[ebuild  N     ] sys-devel/gcc-4.5.3-r2  USE="cxx fortran mudflap nptl openmp (-altivec) -bootstrap -build -doc (-fixed-point) -gcj -graphite -gtk (-hardened) (-libssp) -lto (-multilib) -multislot -nls -nocxx -nopie -nossp -objc -objc++ -objc-gc -test -vanilla" 64,862 kB
[ebuild  N     ] sys-apps/man-pages-3.40  USE="-nls" LINGUAS="pl -da -de -fr -it -ja -nl -ro -ru -zh_CN" 1,689 kB
[ebuild  N     ]  sys-apps/man-pages-posix-2003a  949 kB
[ebuild  N     ]   virtual/man-0  0 kB
[nomerge       ] sys-apps/sed-4.2.1  USE="acl -nls (-selinux) -static"
[ebuild  N     ]  virtual/acl-0-r1  USE="-static-libs" 0 kB
[ebuild  N     ] sys-apps/busybox-1.20.1  USE="ipv6 pam -livecd -make-symlinks -math -mdev -savedconfig (-selinux) -sep-usr -static" 2,139 kB
[ebuild  N     ] virtual/shadow-0  0 kB
[ebuild  N     ]  sys-apps/shadow-  USE="cracklib pam -audit -nls (-selinux) -skey" 1,762 kB
[ebuild  N     ]   virtual/pam-0  0 kB
[ebuild  N     ]    sys-libs/pam-1.1.5  USE="berkdb cracklib -audit -debug -nis -nls (-selinux) -test -vim-syntax" 1,584 kB
[nomerge       ] net-misc/rsync-3.0.9  USE="acl iconv ipv6 -static -xattr"
[nomerge       ]  dev-lang/perl-5.12.4-r1  USE="berkdb gdbm -build -debug -doc -ithreads"
[ebuild  N     ]   sys-libs/gdbm-1.8.3-r4  USE="berkdb" 224 kB
[ebuild  N     ]    sys-libs/db-4.8.30  USE="cxx -doc -examples -java -tcl -test" 22,351 kB
[nomerge       ] sys-apps/busybox-1.20.1  USE="ipv6 pam -livecd -make-symlinks -math -mdev -savedconfig (-selinux) -sep-usr -static"
[ebuild  N     ]  sys-kernel/linux-headers-3.1  4,706 kB
[nomerge       ] sys-apps/portage-  USE="(ipc) -build -doc -epydoc (-pypy1_9) -python2 -python3 (-selinux) -xattr" LINGUAS="pl"
[ebuild  N     ]  app-admin/eselect-1.3.1  USE="-doc" 161 kB
[ebuild  N     ]   sys-apps/coreutils-8.14  USE="acl unicode -caps -gmp -nls (-selinux) -static -vanilla -xattr" 4,846 kB
[ebuild  N     ] sys-devel/binutils-2.21.1-r1  USE="cxx zlib -multislot -multitarget -nls -static-libs -test -vanilla" 18,573 kB
[nomerge       ] sys-apps/shadow-  USE="cracklib pam -audit -nls (-selinux) -skey"
[ebuild  N     ]  sys-auth/pambase-20101024-r2  USE="cracklib sha512 -consolekit -debug -gnome-keyring -minimal -mktemp -pam_krb5 -pam_ssh -passwdqc (-selinux)" 4 kB
[ebuild  N     ] virtual/libc-0  0 kB
[ebuild  N     ]  sys-libs/glibc-2.14.1-r3  USE="-debug -gd (-hardened) (-multilib) -profile (-selinux) -vanilla" 16,064 kB
[ebuild  N     ] sys-apps/sed-4.2.1  USE="acl -nls (-selinux) -static" 879 kB
[ebuild  N     ] net-misc/iputils-20101006-r2  USE="ipv6 ssl -SECURITY_HAZARD -doc -idn -static" 114 kB
[nomerge       ] net-misc/openssh-5.9_p1-r4  USE="hpn pam tcpd -X -X509 -kerberos -ldap -libedit (-selinux) -skey -static"
[nomerge       ]  dev-libs/openssl-1.0.0j  USE="zlib -bindist -gmp -kerberos -rfc3779 -sse2 -static-libs -test"
[ebuild  N     ]   app-misc/ca-certificates-20111025  182 kB
[ebuild  N     ]    dev-libs/openssl-1.0.0j  USE="zlib -bindist -gmp -kerberos -rfc3779 -sse2 -static-libs -test" 3,958 kB
[nomerge       ] sys-apps/openrc-  USE="pam unicode -debug -ncurses (-selinux) -static-libs"
[ebuild  N     ]  virtual/init-0  0 kB
[ebuild  N     ]   sys-apps/sysvinit-2.88-r3  USE="(-ibm) (-selinux) -static" 104 kB
[ebuild  N     ] sys-apps/util-linux-2.20.1-r2  USE="cramfs crypt unicode -ddate -loop-aes -ncurses -nls -old-linux -perl (-selinux) -slang -static-libs (-uclibc)" 4,507 kB
[ebuild  N     ]  virtual/os-headers-0  0 kB
[ebuild  N     ] virtual/modutils-0  0 kB
[ebuild  N     ]  sys-apps/module-init-tools-3.16-r1  USE="-static" 233 kB
[ebuild  N     ] sys-apps/file-5.09  USE="zlib -python -static-libs" 594 kB
[nomerge       ] sys-apps/shadow-  USE="cracklib pam -audit -nls (-selinux) -skey"
[ebuild  N     ]  sys-libs/cracklib-2.8.16  USE="-nls -python" 604 kB
[ebuild  N     ]   sys-libs/zlib-  USE="-minizip -static-libs" 536 kB

Total: 71 packages (71 new), Size of downloads: 199,985 kB

 * Error: circular dependencies:

(sys-devel/gcc-4.5.3-r2::gentoo, ebuild scheduled for merge) depends on
 (sys-libs/glibc-2.14.1-r3::gentoo, ebuild scheduled for merge) (buildtime)
  (sys-devel/gcc-4.5.3-r2::gentoo, ebuild scheduled for merge) (buildtime)

 * Note that circular dependencies can often be avoided by temporarily
 * disabling USE flags that trigger optional dependencies.

This is my install on VMWare.
Earlier, when i instal on physical machines, changing makeopts flag to -j1 solved problem, but not now.
So, i don't know what shloud i do :(

My confing files:



CFLAGS="-march=core2 -O2 -pipe -fomit-frame-pointer"
GENTOO_MIRRORS=" rsync://"
USE="-X -nls -doc -ncurses -opengl -alsa -esd -kde -gt -gnome -gtk -gtk2 -png -jpeg -tiff -gif -truetype -xinerama acpi lm_sensors sensord usb"

portage info :

Portage (default/linux/x86/10.0, gcc-4.5.3, unavailable, 3.2.12-gentooWawGate01 i686)
System uname: Linux-3.2.12-gentooWawGate01-i686-Intel-R-_Xeon-R-_CPU_E5410_@_2.33GHz-with-gentoo-2.1
Timestamp of tree: Fri, 13 Jul 2012 10:15:01 +0000
Repositories: gentoo
CFLAGS="-march=core2 -O2 -pipe -fomit-frame-pointer"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/gconf /etc/gentoo-release /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-march=core2 -O2 -pipe -fomit-frame-pointer"
FCFLAGS="-O2 -march=i686 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distlocks ebuild-locks fixlafiles news parallel-fetch parse-eapi-ebuild-head protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch"
FFLAGS="-O2 -march=i686 -pipe"
GENTOO_MIRRORS=" rsync://"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
USE="acl acpi berkdb bzip2 cli cracklib crypt cups cxx dri fortran gdbm gpm iconv ipv6 lm_sensors modules mudflap nptl openmp pam pcre pppd readline sensord session ssl tcpd unicode usb x86 xorg zlib" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1 emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter mmap_emul mulaw multi null plug rate route share shm softvol" APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="pl" PHP_TARGETS="php5-3" PYTHON_TARGETS="python3_2 python2_7" RUBY_TARGETS="ruby18 ruby19" USERLAND="GNU" VIDEO_CARDS="fbdev glint intel mach64 mga neomagic nouveau nv r128 radeon savage sis tdfx trident vesa via vmware dummy v4l" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"

gcc -v:

Using built-in specs.
Target: i686-pc-linux-gnu
Configured with: /var/tmp/portage/sys-devel/gcc-4.5.3-r2/work/gcc-4.5.3/configure --prefix=/usr --bindir=/usr/i686-pc-linux-gnu/gcc-bin/4.5.3 --includedir=/usr/lib/gcc/i686-pc-linux-gnu/4.5.3/include --datadir=/usr/share/gcc-data/i686-pc-linux-gnu/4.5.3 --mandir=/usr/share/gcc-data/i686-pc-linux-gnu/4.5.3/man --infodir=/usr/share/gcc-data/i686-pc-linux-gnu/4.5.3/info --with-gxx-include-dir=/usr/lib/gcc/i686-pc-linux-gnu/4.5.3/include/g++-v4 --host=i686-pc-linux-gnu --build=i686-pc-linux-gnu --disable-altivec --disable-fixed-point --without-ppl --without-cloog --disable-lto --enable-nls --without-included-gettext --with-system-zlib --enable-obsolete --disable-werror --enable-secureplt --disable-multilib --enable-libmudflap --disable-libssp --enable-libgomp --with-python-dir=/share/gcc-data/i686-pc-linux-gnu/4.5.3/python --enable-checking=release --disable-libgcj --with-arch=i686 --enable-languages=c,c++,fortran --enable-shared --enable-threads=posix --enable-__cxa_atexit --enable-clocale=gnu --enable-targets=all --with-bugurl= --with-pkgversion='Gentoo 4.5.3-r2 p1.5, pie-0.4.7'
Thread model: posix
gcc version 4.5.3 (Gentoo 4.5.3-r2 p1.5, pie-0.4.7)

and package.use :

media-libs/gd jpeg png
sys-libs/gdbm berkdb
#net-proxy/squid tproxy
net-misc/openvpn  iproute2 passwordsave
net-proxy/tsocks  tordns
net-proxy/squid kerberos radius ldap
sys-libs/ncurses -gpm

So Please Help :roll: :)
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Retired Dev

Joined: 19 Dec 2002
Posts: 4572
Location: Suzhou, China

PostPosted: Sun Jul 15, 2012 2:13 pm    Post subject: Reply with quote

It looks like there is something wrong with your system. What is your current installed glibc version? The emerge --info output says it's unavailable...
"Those who deny freedom to others deserve it not for themselves." - Abraham Lincoln
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Joined: 13 Sep 2005
Posts: 162
Location: WARSAW

PostPosted: Sun Jul 15, 2012 2:21 pm    Post subject: Reply with quote

Hmm, is very strange :

      Latest version available: 2.14.1-r3
      Latest version installed: [ Not Installed ]
      Size of files: 16,063 kB
      Description:   GNU libc6 (also called glibc2) C library
      License:       LGPL-2

Something is realy wrong..

When i want to emerge glibc, result is same as emerge -DuNav system (on top):( What I Can do to repair this system :D ?

OK I Give up :oops: Last night give me new installation :) Now everything work great! :) Anyway thanks for help :)
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